HL_8SCB_083
3D structure
- PDB id
- 8SCB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Terminating ribosome with SRI-41315
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- UGCGAGAA
- Length
- 8 nucleotides
- Bulged bases
- 8SCB|1|8|G|60
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8SCB_083 not in the Motif Atlas
- Geometric match to HL_1ET4_001
- Geometric discrepancy: 0.2648
- The information below is about HL_1ET4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_86769.4
- Basepair signature
- cWW-cWW-cSH-F
- Number of instances in this motif group
- 5
Unit IDs
8SCB|1|8|U|55
8SCB|1|8|G|56
8SCB|1|8|C|57
8SCB|1|8|G|58
8SCB|1|8|A|59
8SCB|1|8|G|60
8SCB|1|8|A|61
8SCB|1|8|A|62
Current chains
- Chain 8
- 5.8S_rRNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain X
- eL23
- Chain h
- eL35
- Chain j
- Ribosomal protein L37
- Chain l
- eL39
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