HL_8SCB_116

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

CGUUCAG

Length

7 nucleotides

Bulged bases

8SCB|1|9|U|1462

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8SCB_116 not in the Motif Atlas

Homologous match to HL_8C3A_222

Geometric discrepancy: 0.4693

The information below is about HL_8C3A_222

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37369.1

Basepair signature

cWW-tSH-F-F-F

Number of instances in this motif group

8

Unit IDs

8SCB|1|9|C|1460
8SCB|1|9|G|1461
8SCB|1|9|U|1462
8SCB|1|9|U|1463
8SCB|1|9|C|1464
8SCB|1|9|A|1465
8SCB|1|9|G|1466

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain RR

eS17