HL_8SYK_002
3D structure
- PDB id
- 8SYK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of RNA device 43 truncation mutant 3 (U100C), holo state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.06 Å
Loop
- Sequence
- CCAAAUAG
- Length
- 8 nucleotides
- Bulged bases
- 8SYK|1|A|A|35, 8SYK|1|A|A|36
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02817.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8SYK|1|A|C|32
8SYK|1|A|C|33
8SYK|1|A|A|34
8SYK|1|A|A|35
8SYK|1|A|A|36
8SYK|1|A|U|37
8SYK|1|A|A|38
8SYK|1|A|G|39
Current chains
- Chain A
- RNA device 43 truncation mutant 3 (U100C)
Nearby chains
- Chain D
- RNA device 43 truncation mutant 3 (U100C)
Coloring options: