HL_8SYK_003
3D structure
- PDB id
- 8SYK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of RNA device 43 truncation mutant 3 (U100C), holo state
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.06 Å
Loop
- Sequence
- GAAGAAUACGACC
- Length
- 13 nucleotides
- Bulged bases
- 8SYK|1|A|A|62, 8SYK|1|A|U|63, 8SYK|1|A|G|66
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_16398.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8SYK|1|A|G|57
8SYK|1|A|A|58
8SYK|1|A|A|59
8SYK|1|A|G|60
8SYK|1|A|A|61
8SYK|1|A|A|62
8SYK|1|A|U|63
8SYK|1|A|A|64
8SYK|1|A|C|65
8SYK|1|A|G|66
8SYK|1|A|A|67
8SYK|1|A|C|68
8SYK|1|A|C|69
Current chains
- Chain A
- RNA device 43 truncation mutant 3 (U100C)
Nearby chains
- Chain C
- RNA device 43 truncation mutant 3 (U100C)
Coloring options: