HL_8T5D_023
3D structure
- PDB id
- 8T5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGAAUAG
- Length
- 7 nucleotides
- Bulged bases
- 8T5D|1|B|U|615
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8T5D_023 not in the Motif Atlas
- Geometric match to HL_7Z4O_002
- Geometric discrepancy: 0.2717
- The information below is about HL_7Z4O_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_49922.4
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8T5D|1|B|C|611
8T5D|1|B|G|612
8T5D|1|B|A|613
8T5D|1|B|A|614
8T5D|1|B|U|615
8T5D|1|B|A|616
8T5D|1|B|G|617
Current chains
- Chain B
- 23S RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
Coloring options: