3D structure

PDB id
8T5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GCUUAGGC
Length
8 nucleotides
Bulged bases
8T5H|1|B|G|549
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8T5H|1|B|G|543
8T5H|1|B|C|544
8T5H|1|B|U|545
8T5H|1|B|U|546
8T5H|1|B|A|547
8T5H|1|B|G|548
8T5H|1|B|G|549
8T5H|1|B|C|550

Current chains

Chain B
23S

Nearby chains

Chain J
50S ribosomal protein L13
Chain R
Ribosomal protein L21

Coloring options:

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