HL_8UIY_026

3D structure

PDB id

8UIY (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ human P-Z state 80S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GGUAAGC

Length

7 nucleotides

Bulged bases

8UIY|1|L5|G|1869

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UIY_026 not in the Motif Atlas

Homologous match to HL_8CRE_024

Geometric discrepancy: 0.0588

The information below is about HL_8CRE_024

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8UIY|1|L5|G|1864
8UIY|1|L5|G|1865
8UIY|1|L5|U|1866
8UIY|1|L5|A|1867
8UIY|1|L5|A|1868
8UIY|1|L5|G|1869
8UIY|1|L5|C|1870

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LI

Ribosomal protein uL16-like