HL_8UIZ_030
3D structure
- PDB id
- 8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CAUGGAAGUCG
- Length
- 11 nucleotides
- Bulged bases
- 8UIZ|1|L5|U|1980, 8UIZ|1|L5|A|1984
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UIZ_030 not in the Motif Atlas
- Homologous match to HL_8CRE_026
- Geometric discrepancy: 0.3671
- The information below is about HL_8CRE_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_19210.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8UIZ|1|L5|C|1978
8UIZ|1|L5|A|1979
8UIZ|1|L5|U|1980
8UIZ|1|L5|G|1981
8UIZ|1|L5|G|1982
8UIZ|1|L5|A|1983
8UIZ|1|L5|A|1984
8UIZ|1|L5|G|1985
8UIZ|1|L5|U|1986
8UIZ|1|L5|C|1987
8UIZ|1|L5|G|1988
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain Lt
- Large ribosomal subunit protein uL11
Coloring options: