HL_8UIZ_111
3D structure
- PDB id
- 8UIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P-E state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.43 Å
Loop
- Sequence
- CGUUCAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UIZ_111 not in the Motif Atlas
- Homologous match to HL_8CRE_221
- Geometric discrepancy: 0.1631
- The information below is about HL_8CRE_221
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_76371.1
- Basepair signature
- cWW-tSH-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8UIZ|1|S2|C|1460
8UIZ|1|S2|G|1461
8UIZ|1|S2|U|1462
8UIZ|1|S2|U|1463
8UIZ|1|S2|C|1464
8UIZ|1|S2|A|1465
8UIZ|1|S2|G|1466
Current chains
- Chain S2
- 18S rRNA [Homo sapiens]
Nearby chains
- Chain SR
- 40S ribosomal protein S17
- Chain Sg
- Receptor of activated protein C kinase 1
Coloring options: