HL_8UJ9_009
3D structure
- PDB id
- 8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GGUAAACUCC
- Length
- 10 nucleotides
- Bulged bases
- 8UJ9|1|L5|G|315, 8UJ9|1|L5|U|316
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UJ9_009 not in the Motif Atlas
- Homologous match to HL_8CRE_009
- Geometric discrepancy: 0.1306
- The information below is about HL_8CRE_009
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_77600.2
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8UJ9|1|L5|G|314
8UJ9|1|L5|G|315
8UJ9|1|L5|U|316
8UJ9|1|L5|A|317
8UJ9|1|L5|A|318
8UJ9|1|L5|A|319
8UJ9|1|L5|C|320
8UJ9|1|L5|U|321
8UJ9|1|L5|C|322
8UJ9|1|L5|C|323
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain LN
- 60S ribosomal protein L15
- Chain La
- 60S ribosomal protein L27a
- Chain Li
- 60S ribosomal protein L36
- Chain Lo
- 60S ribosomal protein L36a
Coloring options: