HL_8UJC_021
3D structure
- PDB id
- 8UJC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human 60S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 8UJC|1|L5|U|1596, 8UJC|1|L5|A|1600, 8UJC|1|L5|A|1601
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UJC_021 not in the Motif Atlas
- Homologous match to HL_8CRE_019
- Geometric discrepancy: 0.0756
- The information below is about HL_8CRE_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_88205.2
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 7
Unit IDs
8UJC|1|L5|A|1593
8UJC|1|L5|C|1594
8UJC|1|L5|G|1595
8UJC|1|L5|U|1596
8UJC|1|L5|G|1597
8UJC|1|L5|C|1598
8UJC|1|L5|A|1599
8UJC|1|L5|A|1600
8UJC|1|L5|A|1601
8UJC|1|L5|U|1602
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LB
- Large ribosomal subunit protein uL3
- Chain LP
- 60S ribosomal protein L17
- Chain Lj
- 60S ribosomal protein L37
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