HL_8UO6_006
3D structure
- PDB id
- 8UO6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- HIV-1 Rev Response Element (RRE) Stem-Loop II (SLII)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.85 Å
Loop
- Sequence
- CAAUGG
- Length
- 6 nucleotides
- Bulged bases (A, C, G, U)
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37462.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8UO6|1|B|C|49
8UO6|1|B|A|50
8UO6|1|B|A|51
8UO6|1|B|U|52
8UO6|1|B|G|53
8UO6|1|B|G|54
Current chains
- Chain B
- HIV-1 Rev Response Element Stem-Loop II with tRNA scaffold
Nearby chains
No other chains within 10ÅColoring options: