Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_8UO6_0011/A/13:22No text annotation
HL_66853.7
HL_8UO6_0021/A/49:54No text annotation
HL_52953.3
HL_8UO6_0031/A/77:83No text annotation
HL_57875.1
HL_8UO6_0041/A/111:119T-loop with 2 stacked bulged bases
HL_28252.8
HL_8UO6_0051/B/13:22No text annotation
HL_66853.7
HL_8UO6_0061/B/49:54No text annotation
HL_52953.3
HL_8UO6_0071/B/77:83No text annotation
HL_48417.5
HL_8UO6_0081/B/111:119T-loop with 2 stacked bulged bases
HL_28252.8

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_8UO6_0011/A/42:43,
1/A/60:62
Single bulged A
IL_31462.6
IL_8UO6_0021/B/41:43,
1/B/60:63
Isolated non-canonical cWW pair
IL_31737.3

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
J3_8UO6_0011/A/37:41,
1/A/63:70,
1/A/90:91
No text annotation
J3_83332.1
J3_8UO6_0021/B/37:41,
1/B/63:70,
1/B/90:91
No text annotation
J3_55773.1
J4_8UO6_0011/A/7:10,
1/A/25:27,
1/A/101:107,
1/A/123:124
No text annotation
J4_70449.28
J4_8UO6_0021/B/7:10,
1/B/25:27,
1/B/101:107,
1/B/123:124
No text annotation
J4_70449.28

Problematic loops

No problematic loops


Coloring options:
Copyright 2025 BGSU RNA group. Page generated in 0.0397 s