HL_8UR0_039
3D structure
- PDB id
- 8UR0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UGCUAAUCUG
- Length
- 10 nucleotides
- Bulged bases
- 8UR0|1|a|G|60, 8UR0|1|a|C|61
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UR0_039 not in the Motif Atlas
- Homologous match to HL_5J7L_134
- Geometric discrepancy: 0.3492
- The information below is about HL_5J7L_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_35677.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8UR0|1|a|U|59
8UR0|1|a|G|60
8UR0|1|a|C|61
8UR0|1|a|U|62
8UR0|1|a|A|63
8UR0|1|a|A|64
8UR0|1|a|U|65
8UR0|1|a|C|66
8UR0|1|a|U|67
8UR0|1|a|G|68
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain 2
- 50S ribosomal protein L23
- Chain e
- 50S ribosomal protein L29
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