HL_8URI_091
3D structure
- PDB id
- 8URI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- CUGGGCGG
- Length
- 8 nucleotides
- Bulged bases
- 8URI|1|a|G|2250
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8URI_091 not in the Motif Atlas
- Homologous match to HL_7RQB_053
- Geometric discrepancy: 0.1206
- The information below is about HL_7RQB_053
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8URI|1|a|C|2248
8URI|1|a|U|2249
8URI|1|a|G|2250
8URI|1|a|G|2252
8URI|1|a|G|2253
8URI|1|a|C|2254
8URI|1|a|G|2255
8URI|1|a|G|2256
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain B
- Transfer RNA; tRNA
- Chain b
- 50S ribosomal protein L27
- Chain v
- 50S ribosomal protein L16
Coloring options: