HL_8URM_051

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

8URM|1|1|C|2145, 8URM|1|1|C|2146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8URM_051 not in the Motif Atlas

Geometric match to HL_8HNT_002

Geometric discrepancy: 0.3435

The information below is about HL_8HNT_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56676.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

8URM|1|1|C|2143
8URM|1|1|G|2144
8URM|1|1|C|2145
8URM|1|1|C|2146
8URM|1|1|A|2147
8URM|1|1|G|2148

Current chains

Chain 1

13S ribosomal RNA

Nearby chains