Motif HL_56676.1 Version HL_56676.1 of this group appears in releases 3.95 to 4.9
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 1-6 | 2-5 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_6DLR_001 | 6DLR | 0.0000 | 0 | UNCG variation | A | Guanidine-I riboswitch | C | 27 | U | 28 | U | 29 | C | 30 | G | 31 | G | 32 | cWW | tSW |
| 2 | HL_8HNT_002 | 8HNT | 0.6372 | 0 | B | sgRNA | U | 103 | G | 104 | U | 105 | A | 106 | A | 107 | G | 108 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUUCGG | 1 |
| UGUAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUCG | 1 |
| GUAA | 1 |
Release history
| Release | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 | 4.7 | 4.8 | 4.9 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 | 2026-02-25 | 2026-03-25 | 2026-04-22 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- UNCG variation (1)
- (1)
- Basepair signature
- cWW-F-F
- Heat map statistics
- Min 0.64 | Avg 0.32 | Max 0.64
Coloring options: