HL_8URM_052

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUAAUCC

Length

7 nucleotides

Bulged bases

8URM|1|1|A|2211, 8URM|1|1|U|2213

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8URM_052 not in the Motif Atlas

Geometric match to HL_5J7L_185

Geometric discrepancy: 0.1421

The information below is about HL_5J7L_185

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.4

Basepair signature

cWW-F-F-F

Number of instances in this motif group

10

Unit IDs

8URM|1|1|G|2209
8URM|1|1|U|2210
8URM|1|1|A|2211
8URM|1|1|A|2212
8URM|1|1|U|2213
8URM|1|1|C|2214
8URM|1|1|C|2215

Current chains

Chain 1

13S ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L2