HL_8URY_033
3D structure
- PDB id
- 8URY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAUAAA
- Length
- 7 nucleotides
- Bulged bases
- 8URY|1|D|U|1168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8URY_033 not in the Motif Atlas
- Homologous match to HL_4LFB_027
- Geometric discrepancy: 0.2766
- The information below is about HL_4LFB_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
8URY|1|D|U|1165
8URY|1|D|G|1166
8URY|1|D|A|1167
8URY|1|D|U|1168
8URY|1|D|A|1169
8URY|1|D|A|1170
8URY|1|D|A|1171
Current chains
- Chain D
- 16S rRNA
Nearby chains
- Chain F
- 30S ribosomal protein S21
- Chain G
- 30S ribosomal protein S2
- Chain H
- Small ribosomal subunit protein bS1
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