HL_8URY_104
3D structure
- PDB id
- 8URY (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8URY|1|a|G|2751, 8URY|1|a|C|2755
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8URY_104 not in the Motif Atlas
- Homologous match to HL_4WF9_062
- Geometric discrepancy: 0.1146
- The information below is about HL_4WF9_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 10
Unit IDs
8URY|1|a|C|2745
8URY|1|a|U|2746
8URY|1|a|G|2747
8URY|1|a|A|2748
8URY|1|a|A|2749
8URY|1|a|A|2750
8URY|1|a|G|2751
8URY|1|a|C|2752
8URY|1|a|A|2753
8URY|1|a|U|2754
8URY|1|a|C|2755
8URY|1|a|U|2756
8URY|1|a|A|2757
8URY|1|a|A|2758
8URY|1|a|G|2759
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain p
- 50S ribosomal protein L6
- Chain q
- 50S ribosomal protein L36
- Chain s
- Large ribosomal subunit protein uL13
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