HL_8UT0_012
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- UAAUUCA
- Length
- 7 nucleotides
- Bulged bases
- 8UT0|1|2|A|452, 8UT0|1|2|U|454, 8UT0|1|2|C|455
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UT0_012 not in the Motif Atlas
- Homologous match to HL_8P9A_201
- Geometric discrepancy: 0.2222
- The information below is about HL_8P9A_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48417.5
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 26
Unit IDs
8UT0|1|2|U|450
8UT0|1|2|A|451
8UT0|1|2|A|452
8UT0|1|2|U|453
8UT0|1|2|U|454
8UT0|1|2|C|455
8UT0|1|2|A|456
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain SS
- 40S ribosomal protein S4-A
- Chain Sd
- 40S ribosomal protein S24-A
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