HL_8UT0_064

3D structure

PDB id

8UT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.22 Å

Loop

Sequence

UUGAUAUGAUG

Length

11 nucleotides

Bulged bases

8UT0|1|A|A|1352, 8UT0|1|A|U|1353, 8UT0|1|A|G|1354, 8UT0|1|A|U|1356

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UT0|1|A|U|1347
8UT0|1|A|U|1348
8UT0|1|A|G|1349
8UT0|1|A|A|1350
8UT0|1|A|U|1351
8UT0|1|A|A|1352
8UT0|1|A|U|1353
8UT0|1|A|G|1354
8UT0|1|A|A|1355
8UT0|1|A|U|1356
8UT0|1|A|G|1357

Current chains

Chain A

25S rRNA

Nearby chains

Chain LF

60S ribosomal protein L4-A

Chain LH

60S ribosomal protein L6-B

Chain LS

60S ribosomal protein L18-A

Chain Lg

60S ribosomal protein L32