HL_8UT0_068
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- GAAGCU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UT0_068 not in the Motif Atlas
- Homologous match to HL_8C3A_033
- Geometric discrepancy: 0.0885
- The information below is about HL_8C3A_033
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8UT0|1|A|G|1544
8UT0|1|A|A|1545
8UT0|1|A|A|1546
8UT0|1|A|G|1547
8UT0|1|A|C|1548
8UT0|1|A|U|1549
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LP
- 60S ribosomal protein L15-A
- Chain Ll
- 60S ribosomal protein L37-A
Coloring options: