HL_8UT0_086

3D structure

PDB id

8UT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.22 Å

Loop

Sequence

AAUUCAUUUU

Length

10 nucleotides

Bulged bases

8UT0|1|A|C|2539

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UT0|1|A|A|2535
8UT0|1|A|A|2536
8UT0|1|A|U|2537
8UT0|1|A|U|2538
8UT0|1|A|C|2539
8UT0|1|A|A|2540
8UT0|1|A|U|2541
8UT0|1|A|U|2542
8UT0|1|A|U|2543
8UT0|1|A|U|2544

Current chains

Chain A

25S rRNA

Nearby chains

Chain LJ

60S ribosomal protein L8-A

Chain Li

60S ribosomal protein L34-A

Chain SQ

40S ribosomal protein S1-A