HL_8UT0_088
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CUGGGGCGG
- Length
- 9 nucleotides
- Bulged bases
- 8UT0|1|A|G|2618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UT0_088 not in the Motif Atlas
- Homologous match to HL_8P9A_165
- Geometric discrepancy: 0.1451
- The information below is about HL_8P9A_165
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_11974.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
8UT0|1|A|C|2616
8UT0|1|A|U|2617
8UT0|1|A|G|2618
8UT0|1|A|G|2619
8UT0|1|A|G|2620
8UT0|1|A|G|2621
8UT0|1|A|C|2622
8UT0|1|A|G|2623
8UT0|1|A|G|2624
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LL
- 60S ribosomal protein L10
- Chain Ld
- 60S ribosomal protein L29
- Chain Ls
- Translation factor eIF5A
- Chain n
- Transfer RNA; tRNA
Coloring options: