HL_8UT0_103
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CGGAAAGG
- Length
- 8 nucleotides
- Bulged bases
- 8UT0|1|A|A|3243, 8UT0|1|A|A|3244, 8UT0|1|A|G|3246
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UT0_103 not in the Motif Atlas
- Homologous match to HL_8P9A_180
- Geometric discrepancy: 0.1073
- The information below is about HL_8P9A_180
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_07886.3
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 6
Unit IDs
8UT0|1|A|C|3240
8UT0|1|A|G|3241
8UT0|1|A|G|3242
8UT0|1|A|A|3243
8UT0|1|A|A|3244
8UT0|1|A|A|3245
8UT0|1|A|G|3246
8UT0|1|A|G|3247
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain LQ
- 60S ribosomal protein L16-A
Coloring options: