HL_8UT0_104

3D structure

PDB id

8UT0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.22 Å

Loop

Sequence

GUAUACGAC

Length

9 nucleotides

Bulged bases

8UT0|1|A|U|3304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UT0_104 not in the Motif Atlas

Homologous match to HL_8P9A_181

Geometric discrepancy: 0.1274

The information below is about HL_8P9A_181

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.6

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

8UT0|1|A|G|3303
8UT0|1|A|U|3304
8UT0|1|A|A|3305
8UT0|1|A|U|3306
8UT0|1|A|A|3307
8UT0|1|A|C|3308
8UT0|1|A|G|3309
8UT0|1|A|A|3310
8UT0|1|A|C|3311

Current chains

Chain A

25S rRNA

Nearby chains

Chain LE

60S ribosomal protein L3

Chain LR

60S ribosomal protein L17-A