HL_8UTI_018

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GUCUUC

Length

6 nucleotides

Bulged bases

8UTI|1|A|C|765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTI_018 not in the Motif Atlas

Homologous match to HL_8C3A_018

Geometric discrepancy: 0.2618

The information below is about HL_8C3A_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84570.1

Basepair signature

cWW-cWW-F

Number of instances in this motif group

6

Unit IDs

8UTI|1|A|G|763
8UTI|1|A|U|764
8UTI|1|A|C|765
8UTI|1|A|U|766
8UTI|1|A|U|767
8UTI|1|A|C|768

Current chains

Chain A

25S rRNA

Nearby chains

Chain LN

60S ribosomal protein L13-A