HL_8UTI_034

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GUUUAUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTI_034 not in the Motif Atlas

Homologous match to HL_8P9A_149

Geometric discrepancy: 0.1192

The information below is about HL_8P9A_149

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97067.1

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

8UTI|1|A|G|1719
8UTI|1|A|U|1720
8UTI|1|A|U|1721
8UTI|1|A|U|1722
8UTI|1|A|A|1723
8UTI|1|A|U|1724
8UTI|1|A|C|1725

Current chains

Chain A

25S rRNA

Nearby chains

Chain LT

60S ribosomal protein L19-A

Chain Lr

60S ribosomal protein L43-A