Motif HL_97067.1 Version HL_97067.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 1-7 | 2-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_9AXU_035 | 9AXU | 0.0000 | 0 | 2 | LSU rRNA | G | 1759 | U | 1760 | U | 1761 | U | 1762 | A | 1763 | U | 1764 | C | 1765 | cWW | cwW | |
| 2 | HL_8OI5_034 | 8OI5 | 0.0949 | 0 | 1 | LSU rRNA | G | 1715 | U | 1716 | U | 1717 | U | 1718 | A | 1719 | U | 1720 | C | 1721 | cWW | cwW | |
| 3 | HL_8P9A_149 | 8P9A | 0.1144 | 0 | AR | LSU rRNA | G | 1719 | U | 1720 | U | 1721 | U | 1722 | A | 1723 | U | 1724 | C | 1725 | cWW | cwW | |
| 4 | HL_8KAJ_003 | 8KAJ | 0.9060 | 0 | I | tracrRNA | C | 86 | G | 87 | A | 88 | G | 89 | U | 90 | C | 91 | G | 92 | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUUUAUC | 3 |
| CGAGUCG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUUAU | 3 |
| GAGUC | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (4)
- Basepair signature
- cWW-cWW-F-F-F
- Heat map statistics
- Min 0.09 | Avg 0.38 | Max 0.92
Coloring options: