HL_8UTI_093

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CUUAAUUG

Length

8 nucleotides

Bulged bases

8UTI|1|E|U|1314

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTI_093 not in the Motif Atlas

Homologous match to HL_8P9A_218

Geometric discrepancy: 0.1106

The information below is about HL_8P9A_218

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_63894.2

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

19

Unit IDs

8UTI|1|E|C|1309
8UTI|1|E|U|1310
8UTI|1|E|U|1311
8UTI|1|E|A|1312
8UTI|1|E|A|1313
8UTI|1|E|U|1314
8UTI|1|E|U|1315
8UTI|1|E|G|1316

Current chains

Chain E

18S rRNA

Nearby chains

Chain SG

40S ribosomal protein S17-B