HL_8UTJ_004

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

8UTJ|1|1|U|139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTJ_004 not in the Motif Atlas

Geometric match to HL_8T29_002

Geometric discrepancy: 0.2264

The information below is about HL_8T29_002

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.4

Basepair signature

cWW-tSW-F

Number of instances in this motif group

63

Unit IDs

8UTJ|1|1|U|137
8UTJ|1|1|U|138
8UTJ|1|1|U|139
8UTJ|1|1|C|140
8UTJ|1|1|G|141
8UTJ|1|1|A|142

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain T

50S ribosomal protein L23