HL_8UTJ_048
3D structure
- PDB id
- 8UTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- G(PSU)AACUA(PSU)AAC
- Length
- 11 nucleotides
- Bulged bases
- 8UTJ|1|1|A|1913
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UTJ_048 not in the Motif Atlas
- Geometric match to HL_9DFE_046
- Geometric discrepancy: 0.1434
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8UTJ|1|1|G|1910
8UTJ|1|1|PSU|1911
8UTJ|1|1|A|1912
8UTJ|1|1|A|1913
8UTJ|1|1|C|1914
8UTJ|1|1|U|1915
8UTJ|1|1|A|1916
8UTJ|1|1|PSU|1917
8UTJ|1|1|A|1918
8UTJ|1|1|A|1919
8UTJ|1|1|C|1920
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 5
- Transfer RNA; tRNA
Coloring options: