HL_8UTJ_096

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UTJ_096 not in the Motif Atlas

Geometric match to HL_8CRE_010

Geometric discrepancy: 0.1142

The information below is about HL_8CRE_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8UTJ|1|2|C|1265
8UTJ|1|2|G|1266
8UTJ|1|2|C|1267
8UTJ|1|2|G|1268
8UTJ|1|2|A|1269
8UTJ|1|2|G|1270

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain r

30S ribosomal protein S13

Chain x

Small ribosomal subunit protein uS19