HL_8UU4_009

3D structure

PDB id

8UU4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUUG

Length

4 nucleotides

Bulged bases

8UU4|1|A|U|284

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UU4_009 not in the Motif Atlas

Geometric match to HL_4V88_198

Geometric discrepancy: 0.3544

The information below is about HL_4V88_198

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

8UU4|1|A|C|283
8UU4|1|A|U|284
8UU4|1|A|U|285
8UU4|1|A|G|286

Current chains

Chain A

23S Ribosomal RNA

Nearby chains