HL_8UU4_048
3D structure
- PDB id
- 8UU4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HPF (structure I-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 8UU4|1|A|U|1988
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU4_048 not in the Motif Atlas
- Homologous match to HL_5J7L_182
- Geometric discrepancy: 0.0958
- The information below is about HL_5J7L_182
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
8UU4|1|A|G|1982
8UU4|1|A|G|1983
8UU4|1|A|U|1984
8UU4|1|A|A|1985
8UU4|1|A|A|1986
8UU4|1|A|G|1987
8UU4|1|A|U|1988
8UU4|1|A|U|1989
8UU4|1|A|C|1990
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain M
- Large ribosomal subunit protein uL14
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: