HL_8UU5_007

3D structure

PDB id

8UU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AAAAAU

Length

6 nucleotides

Bulged bases

8UU5|1|A|A|230

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UU5_007 not in the Motif Atlas

Homologous match to HL_7A0S_007

Geometric discrepancy: 0.21

The information below is about HL_7A0S_007

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53890.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

15

Unit IDs

8UU5|1|A|A|227
8UU5|1|A|A|228
8UU5|1|A|A|229
8UU5|1|A|A|230
8UU5|1|A|A|231
8UU5|1|A|U|232

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain N

Large ribosomal subunit protein uL15