HL_8UU7_044
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUAGCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8UU7|1|A|A|1813, 8UU7|1|A|G|1814, 8UU7|1|A|C|1815, 8UU7|1|A|A|1819
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU7_044 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1158
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8UU7|1|A|U|1810
8UU7|1|A|U|1811
8UU7|1|A|U|1812
8UU7|1|A|A|1813
8UU7|1|A|G|1814
8UU7|1|A|C|1815
8UU7|1|A|A|1816
8UU7|1|A|A|1817
8UU7|1|A|A|1818
8UU7|1|A|A|1819
8UU7|1|A|A|1820
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- Large ribosomal subunit protein bL34
- Chain C
- Large ribosomal subunit protein uL2
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