HL_8UU7_065
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 8UU7|1|A|G|2784, 8UU7|1|A|C|2788
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU7_065 not in the Motif Atlas
- Homologous match to HL_5J7L_199
- Geometric discrepancy: 0.1348
- The information below is about HL_5J7L_199
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
8UU7|1|A|C|2778
8UU7|1|A|U|2779
8UU7|1|A|G|2780
8UU7|1|A|A|2781
8UU7|1|A|A|2782
8UU7|1|A|A|2783
8UU7|1|A|G|2784
8UU7|1|A|C|2785
8UU7|1|A|A|2786
8UU7|1|A|U|2787
8UU7|1|A|C|2788
8UU7|1|A|U|2789
8UU7|1|A|A|2790
8UU7|1|A|A|2791
8UU7|1|A|G|2792
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 8
- Large ribosomal subunit protein bL36
- Chain G
- Large ribosomal subunit protein uL6
- Chain L
- Large ribosomal subunit protein uL13
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