HL_8UU8_055

3D structure

PDB id

8UU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UGGAUGGAAAUCA

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU8|1|A|U|2335
8UU8|1|A|G|2336
8UU8|1|A|G|2337
8UU8|1|A|A|2338
8UU8|1|A|U|2339
8UU8|1|A|G|2340
8UU8|1|A|G|2341
8UU8|1|A|A|2342
8UU8|1|A|A|2343
8UU8|1|A|A|2344
8UU8|1|A|U|2345
8UU8|1|A|C|2346
8UU8|1|A|A|2347

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain F

Large ribosomal subunit protein uL5

Chain Q

Large ribosomal subunit protein uL18