HL_8UU9_027
3D structure
- PDB id
- 8UU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UGAUAAGA
- Length
- 8 nucleotides
- Bulged bases
- 8UU9|1|A|U|1004, 8UU9|1|A|G|1007
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU9_027 not in the Motif Atlas
- Homologous match to HL_7RQB_027
- Geometric discrepancy: 0.1097
- The information below is about HL_7RQB_027
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_35490.2
- Basepair signature
- cWW-tSH-F-F
- Number of instances in this motif group
- 299
Unit IDs
8UU9|1|A|U|1001
8UU9|1|A|G|1002
8UU9|1|A|A|1003
8UU9|1|A|U|1004
8UU9|1|A|A|1005
8UU9|1|A|A|1006
8UU9|1|A|G|1007
8UU9|1|A|A|1008
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain B
- 5S ribosomal RNA; 5S rRNA
- Chain O
- Large ribosomal subunit protein uL16
Coloring options: