HL_8UU9_047
3D structure
- PDB id
- 8UU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 8UU9|1|A|A|1946
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UU9_047 not in the Motif Atlas
- Geometric match to HL_5TBW_049
- Geometric discrepancy: 0.1775
- The information below is about HL_5TBW_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8UU9|1|A|G|1943
8UU9|1|A|U|1944
8UU9|1|A|A|1945
8UU9|1|A|A|1946
8UU9|1|A|C|1947
8UU9|1|A|U|1948
8UU9|1|A|A|1949
8UU9|1|A|U|1950
8UU9|1|A|A|1951
8UU9|1|A|A|1952
8UU9|1|A|C|1953
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
- Chain v
- GTPase HflX
Coloring options: