HL_8UXA_013
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUUGCAAUA
- Length
- 10 nucleotides
- Bulged bases
- 8UXA|1|A|U|638, 8UXA|1|A|A|642, 8UXA|1|A|U|643
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_013 not in the Motif Atlas
- Geometric match to HL_8OI5_019
- Geometric discrepancy: 0.141
- The information below is about HL_8OI5_019
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
8UXA|1|A|U|635
8UXA|1|A|G|636
8UXA|1|A|U|637
8UXA|1|A|U|638
8UXA|1|A|G|639
8UXA|1|A|C|640
8UXA|1|A|A|641
8UXA|1|A|A|642
8UXA|1|A|U|643
8UXA|1|A|A|644
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL3m
- Chain O
- Large ribosomal subunit protein uL22m
- Chain W
- Large ribosomal subunit protein bL32m
- Chain Y
- Large ribosomal subunit protein bL34m
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