HL_8UXA_014

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UGAAAGA

Length

7 nucleotides

Bulged bases

8UXA|1|A|A|672, 8UXA|1|A|G|675

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_014 not in the Motif Atlas

Geometric match to HL_9DFE_022

Geometric discrepancy: 0.1226

The information below is about HL_9DFE_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92935.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

5

Unit IDs

8UXA|1|A|U|670
8UXA|1|A|G|671
8UXA|1|A|A|672
8UXA|1|A|A|673
8UXA|1|A|A|674
8UXA|1|A|G|675
8UXA|1|A|A|676

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain B

Large ribosomal subunit protein uL2m