HL_8UXA_026

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAGUC

Length

7 nucleotides

Bulged bases

8UXA|1|A|U|1645, 8UXA|1|A|U|1648

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_026 not in the Motif Atlas

Geometric match to HL_8B0X_023

Geometric discrepancy: 0.1849

The information below is about HL_8B0X_023

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13184.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

8

Unit IDs

8UXA|1|A|G|1643
8UXA|1|A|U|1644
8UXA|1|A|U|1645
8UXA|1|A|A|1646
8UXA|1|A|G|1647
8UXA|1|A|U|1648
8UXA|1|A|C|1649

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain AA

Small ribosomal subunit protein mS38

Chain B

Large ribosomal subunit protein uL2m

Chain u

Small ribosomal subunit protein uS15m