HL_8UXA_027
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8UXA|1|A|A|1687, 8UXA|1|A|C|1688, 8UXA|1|A|U|1689, 8UXA|1|A|A|1693
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_027 not in the Motif Atlas
- Geometric match to HL_8B0X_073
- Geometric discrepancy: 0.1024
- The information below is about HL_8B0X_073
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8UXA|1|A|U|1684
8UXA|1|A|U|1685
8UXA|1|A|U|1686
8UXA|1|A|A|1687
8UXA|1|A|C|1688
8UXA|1|A|U|1689
8UXA|1|A|A|1690
8UXA|1|A|A|1691
8UXA|1|A|A|1692
8UXA|1|A|A|1693
8UXA|1|A|A|1694
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain B
- Large ribosomal subunit protein uL2m
- Chain Y
- Large ribosomal subunit protein bL34m
Coloring options: