HL_8UXA_035
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AGCAAAAGUAUCU
- Length
- 13 nucleotides
- Bulged bases
- 8UXA|1|A|A|2293, 8UXA|1|A|A|2294, 8UXA|1|A|C|2301
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_035 not in the Motif Atlas
- Geometric match to HL_8B0X_081
- Geometric discrepancy: 0.1475
- The information below is about HL_8B0X_081
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02042.1
- Basepair signature
- cWW-tSH-tHH-tWW-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8UXA|1|A|A|2290
8UXA|1|A|G|2291
8UXA|1|A|C|2292
8UXA|1|A|A|2293
8UXA|1|A|A|2294
8UXA|1|A|A|2295
8UXA|1|A|A|2296
8UXA|1|A|G|2297
8UXA|1|A|U|2298
8UXA|1|A|A|2299
8UXA|1|A|U|2300
8UXA|1|A|C|2301
8UXA|1|A|U|2302
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain K
- Large ribosomal subunit protein uL16m
- Chain R
- Large ribosomal subunit protein bL27m
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