HL_8UXA_045

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

8UXA|1|A|U|2822

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_045 not in the Motif Atlas

Geometric match to HL_9DFE_060

Geometric discrepancy: 0.2726

The information below is about HL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8UXA|1|A|C|2818
8UXA|1|A|U|2819
8UXA|1|A|G|2820
8UXA|1|A|U|2821
8UXA|1|A|U|2822
8UXA|1|A|C|2823
8UXA|1|A|G|2824

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain I

Large ribosomal subunit protein uL14m