HL_8UXA_049

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUGAAUACAUAUUAAA

Length

16 nucleotides

Bulged bases

8UXA|1|A|A|3087, 8UXA|1|A|A|3091, 8UXA|1|A|U|3093

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8UXA_049 not in the Motif Atlas

Geometric match to HL_9E6Q_064

Geometric discrepancy: 0.1182

The information below is about HL_9E6Q_064

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53269.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

10

Unit IDs

8UXA|1|A|U|3081
8UXA|1|A|U|3082
8UXA|1|A|G|3083
8UXA|1|A|A|3084
8UXA|1|A|A|3085
8UXA|1|A|U|3086
8UXA|1|A|A|3087
8UXA|1|A|C|3088
8UXA|1|A|A|3089
8UXA|1|A|U|3090
8UXA|1|A|A|3091
8UXA|1|A|U|3092
8UXA|1|A|U|3093
8UXA|1|A|A|3094
8UXA|1|A|A|3095
8UXA|1|A|A|3096

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain 0

Large ribosomal subunit protein bL36m

Chain F

Large ribosomal subunit protein uL6m

Chain H

Large ribosomal subunit protein uL13m