HL_8UXA_063
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAUUCGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 8UXA|1|AL|U|858
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8UXA_063 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.1668
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8UXA|1|AL|G|851
8UXA|1|AL|A|852
8UXA|1|AL|U|853
8UXA|1|AL|U|854
8UXA|1|AL|C|855
8UXA|1|AL|G|856
8UXA|1|AL|A|857
8UXA|1|AL|U|858
8UXA|1|AL|A|859
8UXA|1|AL|C|860
8UXA|1|AL|C|861
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain AM
- Transfer RNA; tRNA
- Chain AN
- mRNA
- Chain q
- Small ribosomal subunit protein uS11m
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